SciCombinator

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Concept: Yunnan

189

The number of Late Pleistocene hominin species and the timing of their extinction are issues receiving renewed attention following genomic evidence for interbreeding between the ancestors of some living humans and archaic taxa. Yet, major gaps in the fossil record and uncertainties surrounding the age of key fossils have meant that these questions remain poorly understood. Here we describe and compare a highly unusual femur from Late Pleistocene sediments at Maludong (Yunnan), Southwest China, recovered along with cranial remains that exhibit a mixture of anatomically modern human and archaic traits. Our studies show that the Maludong femur has affinities to archaic hominins, especially Lower Pleistocene femora. However, the scarcity of later Middle and Late Pleistocene archaic remains in East Asia makes an assessment of systematically relevant character states difficult, warranting caution in assigning the specimen to a species at this time. The Maludong fossil probably samples an archaic population that survived until around 14,000 years ago in the biogeographically complex region of Southwest China.

Concepts: Humans, Dinosaur, Yunnan, Fossil, Evolution, Human evolution, Human

154

The Lufeng Formation in Lufeng Basin of Yunnan Province, southwestern China preserves one of the richest terrestrial Lower Jurassic vertebrate faunas globally, especially for its basal sauropodomorphs, such as Lufengosaurus and Yunnanosaurus. Here we report a new taxon, Xingxiulong chengi gen. et sp. nov. represented by three partial skeletons with overlapping elements. Xingxiulong possesses a number of autapomorphies, such as transversely expanded plate-like summit on top of the neural spine of posterior dorsal vertebrae, four sacral vertebrae, robust scapula, and elongated pubic plate approximately 40% of the total length of the pubis. Phylogenetic analysis resolves Xingxiulong as a basal member of Sauropodiformes, and together with another two Lufeng basal sauropodiforms Jingshanosaurus and Yunnanosaurus, they represent the basalmost lineages of this clade, indicating its Asian origin. Although being relatively primitive, Xingxiulong displays some derived features normally occurred in advanced sauropodiforms including sauropods, such as a four sacral-sacrum, a robust scapula, and a pubis with elongated pubic plate. The discovery of Xingxiulong increases the diversity of basal sauropodomorphs from the Lufeng Formation and indicates a more complicated scenario in the early evolution of sauropodiforms.

Concepts: Vertebra, Cladistics, Phylogenetic nomenclature, Pelvis, Kunming, Yunnan, Prosauropoda, Dinosaur

153

Polycyclic aromatic hydrocarbons (PAHs) were analyzed for 136 indoor dust samples collected from Guizhou province, southwest of China. The ∑18PAHs concentrations ranged from 2.18 μg•g-1 to 14.20 μg•g-1 with the mean value of 6.78 μg•g-1. The highest Σ18PAHs concentration was found in dust samples from orefields, followed by city, town and village. Moreover, the mean concentration of Σ18PAHs in indoor dust was at least 10% higher than that of outdoors. The 4-6 rings PAHs, contributing more than 70% of ∑18PAHs, were the dominant species. PAHs ratios, principal component analysis with multiple linear regression (PCA-MLR) and hierarchical clustering analysis (HCA) were applied to evaluate the possible sources. Two major origins of PAHs in indoor dust were identified as vehicle emissions and coal combustion. The mean incremental lifetime cancer risk (ILCR) due to human exposure to indoor dust PAHs in city, town, village and orefield of Guizhou province, China was 6.14×10-6, 5.00×10-6, 3.08×10-6, 6.02×10-6 for children and 5.92×10-6, 4.83×10-6, 2.97×10-6, 5.81×10-6 for adults, respectively.

Concepts: Arithmetic mean, Regression analysis, Aromaticity, Principal component analysis, Yunnan, Naphthalene, Southwest China, Polycyclic aromatic hydrocarbon

102

Peach (Prunus persica, Rosaceae) is an extremely popular tree fruit worldwide, with an annual production near 20 million tons. Peach is widely thought to have origins in China, but its evolutionary history is largely unknown. The oldest evidence for the peach has been Chinese archaeological records dating to 8000-7000 BP. Here, we report eight fossil peach endocarps from late Pliocene strata of Kunming City, Yunnan, southwestern China. The fossils are identical to modern peach endocarps, including size comparable to smaller modern varieties, a single seed, a deep dorsal groove, and presence of deep pits and furrows. These fossils show that China has been a critical region for peach evolution since long before human presence, much less agriculture. Peaches evolved their modern morphology under natural selection, presumably involving large, frugivorous mammals such as primates. Much later, peach size and variety increased through domestication and breeding.

Concepts: Apricot, Paleontology, Kunming, Rosaceae, Prunus, Yunnan, Peach, Evolution

29

Geochemical measurements on well-dated sediment cores from Lake Er (Erhai) are used to determine the timing of changes in metal concentrations over 4,500 years in Yunnan, a borderland region in southwestern China noted for rich mineral deposits, but inadequately documented metallurgical history. Our findings add new insight to the impacts and environmental legacy of human exploitation of metal resources in Yunnan history. We observe an increase in copper at 1500 BC resulting from atmospheric emissions associated with metallurgy. These data clarify the chronological issues related to links between the onset of Yunnan metallurgy and the advent of bronze technology in adjacent Southeast Asia, subjects that have been debated for nearly half a century. We also observe an increase from 1100 to 1300 AD in a number of heavy metals including lead, silver, zinc, and cadmium from atmospheric emissions associated with silver smelting. Culminating during the rule of the Mongols, known as the Yuan Dynasty (1271-1368 CE), these metal concentrations approach levels three to four times higher than those from industrialized mining activity occurring within the catchment. Notably, the concentrations of lead approach levels at which harmful effects may be observed in aquatic organisms. The persistence of this lead pollution over time created an environmental legacy that likely contributes to known issues in modern-day sediment quality. We demonstrate that historic metallurgical production in Yunnan can cause substantial impacts on the sediment quality of lake systems, similar to other paleolimnological findings around the globe.

Concepts: Heavy metal music, Genghis Khan, Zinc, Metal, Mongol Empire, Lead, Copper, Yunnan

28

Leprosy continues to be detected at near stable rates in China even with established control programs, necessitating new knowledge and alternative methods to interrupt transmission. A molecular epidemiology investigation of 190 patients was undertaken to define M. leprae strain types and discern genetic relationships and clusters in endemic and non-endemic regions spanning seventeen provinces and two autonomous regions. The findings support multiple locus variable number of tandem repeat (VNTR) analysis as a useful tool in uncovering characteristic patterns across the multiethnic and divergent geographic landscape of China. Several scenarios of clustering of leprosy from township to provincial to regional levels were recognized, while recent occupational or remote migration showed geographical separation of certain strains. First, prior studies indicated that of the four major M. leprae subtypes defined by single nucleotide polymorphisms (SNPs), only type 3 was present in China, purportedly entering from Europe/West/Central Asia via the Silk Road. However, this study revealed VNTR linked strains that are of type 1 in Guangdong, Fujian and Guangxi in southern China. Second, a subset of VNTR distinguishable strains of type 3, co-exist in these provinces. Third, type 3 strains with rpoT VNTR allele of 4, detected in Japan and Korea were discovered in Jiangsu and Anhui in the east and in western Sichuan bordering Tibet. Fourth, considering the overall genetic diversity, strains of endemic counties of Qiubei, Yunnan; Xing Yi, Guizhou; and across Sichuan in southwest were related. However, closer inspection showed distinct local strains and clusters. Altogether, these insights, primarily derived from VNTR typing, reveal multiple and overlooked paths for spread of leprosy into, within and out of China and invoke attention to historic maritime routes in the South and East China Sea. More importantly, new concepts and approaches for prospective case finding and tracking of leprosy from county to national level have been introduced.

Concepts: Single-nucleotide polymorphism, Guangdong, Yuan Dynasty, Yi people, Yunnan, East China Sea, China, Yangtze River

27

Beauveria bassiana is an important entomopathogenic fungus that not only often causes infection and epidemics of wild insects but some strains also show pathogenicity to the silkworm, Bombyx mori. The present study is about diversity of B. bassiana isolated from the silkworm in southwest China. Five strains of B. bassiana were isolated from infected silkworm. Two isolates, GXtr1009 and GXtr1010, were isolated from infected silkworms treated with two kinds of biological pesticides applied in Guangxi province, and three isolates, SCsk1006, YNsk1106 and GXsk1011, were collected from naturally infected silkworms from different geographical locations in Yunnan and Sichuan. All of the isolates showed highly similar conidia and conidial fructification, but the colony characteristics demonstrated great differences among the isolates. The ITS and 18S rDNA sequence analysis was sufficient to identify all five isolates as B. bassiana. However, the dendrogram, based on the ISSR data, produced two large genetic groups. GXtr1009 and GXtr1010 comprised one group, and SCsk1006, YNsk1106 and GXsk1011 converged in a different large group. The results suggested that, although all of these five B. bassiana strains were pathogenic to silkworms, strains of biological pesticides could be differentiated from strains of naturally infected silkworm via ISSR analysis.

Concepts: Beauveria bassiana, Bombyx mandarina, Fungus, Guizhou, Bombyx, Bombycidae, Bombyx mori, Yunnan

26

A number of 100 Pu-erh tea samples from the 2013 harvest in Yunnan Province (China) were analyzed for 74 pesticides. A total of 11 pesticides were detected. At least 1 pesticide was detected in 56% of the samples. None of the samples contained the 74 monitored pesticides at concentrations above Chinese maximum residual levels. Imidacloprid, bifenthrin and acetamiprid were most frequently found, with percentages of 53%, 46%, and 31%, respectively. These were also the top 3 pesticides with maximum concentrations of 140 μg kg(-1), 246 μg kg(-1) and 672 μg kg(-1), respectively. Residual levels of the monitored pesticides showed no significant correlation with the production time or area of Pu-er tea. Whereas a high incidence of pesticide residues was detected in Pu-erh tea, the contamination levels observed do not pose serious health risks.

Concepts: Black tea, Post-fermented tea, Oolong, Camellia sinensis, Insecticide, Tea, Pu-erh tea, Yunnan

25

The purpose of the study was to analyze the features of arthropathic changes and functional impairments as well as the correlations between them for adult patients suffered with Kashin-Beck disease (KBD) in Aba Tibetan area of Sichuan Province, China.

Concepts: Chengdu, Chongqing, Tibet, Tibetan people, Ngawa Tibetan and Qiang Autonomous Prefecture, Yunnan, Sichuan, Tibet Autonomous Region

24

Species of the genus Gynandropaa within the family Dicroglossidae are typical spiny frogs whose taxonomic status has long been in doubt. We used integrative methods, involving morphological and molecular analyses, to elucidate the phylogenetic relationships, and determine identities and geographic distribution of each valid species. We obtained DNA sequence data of five species of Gynandropaa (complete sequences of the mitochondrial ND2 gene, and 890 bp of 12S rRNA and 16S rRNA partial sequences) from 37 localities (including the topotypes of five described species) and constructed Bayesian and Maximum-likelihood trees to examine phylogeography. Twenty eight morphological variables were taken on 624 specimens. Three clades with clear geographic patterns were recognized: clade C (from southwestern Sichuan Province and Central Yunnan Province), clade E (western Guizhou Province and eastern to central Yunnan Province), and clade W (western to southern Yunnan Province). Integrating morphological characteristics and distribution information, the clades W, E and C represent G. yunnanensis, G. phrynoides and G. sichuanensis respectively. Based on these, we draw the conclusions: 1) the validity of G. phrynoides should be rehabilitated; 2) G. liui is a junior synonym of G. sichuanensis; 3) G. yunnanensis is a valid species while G. bourreti is probably a subspecies of G. yunnanensis with the distribution range from Vietnam to southern Yunnan Province. This study should help to clear up the taxonomic status of Gynandropaa and give important information for understanding the evolution and conservation of these spiny frogs. This article is protected by copyright. All rights reserved.

Concepts: Species, Yi people, Guizhou, Autonomous prefectures of China, Yunnan, Phylogenetics, DNA, Sichuan