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Concept: Castoreum

35

Beavers are the archetypal keystone species, which can profoundly alter ecosystem structure and function through their ecosystem engineering activity, most notably the building of dams. This can have a major impact upon water resource management, flow regimes and water quality. Previous research has predominantly focused on the activities of North American beaver (Castor canadensis) located in very different environments, to the intensive lowland agricultural landscapes of the United Kingdom and elsewhere in Europe. Two Eurasian beavers (Castor fiber) were introduced to a wooded site, situated on a first order tributary, draining from intensively managed grassland. The site was monitored to understand impacts upon water storage, flow regimes and water quality. Results indicated that beaver activity, primarily via the creation of 13 dams, has increased water storage within the site (holding ca. 1000m(3) in beaver ponds) and beavers were likely to have had a significant flow attenuation impact, as determined from peak discharges (mean 30±19% reduction), total discharges (mean 34±9% reduction) and peak rainfall to peak discharge lag times (mean 29±21% increase) during storm events. Event monitoring of water entering and leaving the site showed lower concentrations of suspended sediment, nitrogen and phosphate leaving the site (e.g. for suspended sediment; average entering site: 112±72mgl(-1), average leaving site: 39±37mgl(-1)). Combined with attenuated flows, this resulted in lower diffuse pollutant loads in water downstream. Conversely, dissolved organic carbon concentrations and loads downstream were higher. These observed changes are argued to be directly attributable to beaver activity at the site which has created a diverse wetland environment, reducing downstream hydrological connectivity. Results have important implications for beaver reintroduction programs which may provide nature based solutions to the catchment-scale water resource management issues that are faced in agricultural landscapes.

Concepts: Hydrology, Beaver, European Beaver, Beavers, Castoreum, Fur trade, North American Beaver, Keystone species

21

The Canadian beaver (Castor canadensis) is the largest indigenous rodent in North America. We report a draft annotated assembly of the beaver genome, the first for a large rodent and the first mammalian genome assembled directly from uncorrected and moderate coverage (< 30 ×) long-reads generated by single-molecule sequencing. The genome size is 2.7 Gb estimated by k-mer analysis. We assembled the beaver genome using the new Canu assembler optimized for noisy reads. The resulting assembly was refined using Pilon supported by shortreads (80 ×) and checked for accuracy by congruency against an independent short-read assembly. We scaffolded the assembly using the exon-gene models derived from 9805 full-length open reading frames (FL-ORFs) constructed from the beaver leukocyte and muscle transcriptomes. The final assembly comprised 22,515 contigs with an N50 of 278,680 bp and an N50-scaffold of 317,558 bp. Maximum contig and scaffold lengths were 3.3 and 4.2 Mb, respectively, with a combined scaffold length representing 92% of the estimated genome size. The completeness and accuracy of the scaffold assembly was demonstrated by the complete and precise exon placement for 91.1% of the 9,805 assembled FL-ORFs and 83.1% of the BUSCO (Benchmarking Universal Single-Copy Orthologs) gene set used to assess the quality of genome assemblies. Well-represented were genes involved in dentition and enamel deposition, defining characteristics of rodents with which the beaver is well-endowed. The study provides insights for genome assembly and an important genomics resource for Castoridae and rodent evolutionary biology.

Concepts: DNA, Gene, Genetics, Rodent, Beaver, Castoreum, North American Beaver, Castoridae

5

The North American Beaver (Castor canadensis) is the second largest living rodent and an iconic symbol of Canada. The beaver is a semi-aquatic browser whose diet consists of lignocellulose from a variety of plants. The beaver is a hindgut fermenter and has an enlarged ceacum that houses a complex microbiome. There have been few studies examining the microbial diversity in gastrointestinal tract of hindgut fermenting herbivores. To examine the bacterial and archaeal communities inhabiting the gastrointestinal tract of the beaver, the microbiome of the ceacum and feaces was examined using culture-independent methods. DNA from the microbial community of the ceacum and feaces of 4 adult beavers was extracted, and the16S rRNA gene was sequenced using either bacterial or archaeal specific primers. A total of 1447 and 1435 unique bacterial OTUs were sequenced from the ceacum and feaces, respectively. On average, the majority of OTUs within the ceacum were classified as Bacteroidetes (49.2%) and Firmicutes (47.6%). The feaces was also dominated by OTUs from Bacteroidetes (36.8%) and Firmicutes (58.9%). The composition of bacterial community was not significantly different among animals. The composition of the ceacal and feacal microbiome differed, but this difference is due to changes in the abundance of closely related OTUs, not because of major differences in the taxonomic composition of the communities. Within these communities, known degraders of lignocellulose were identified. In contrast, to the bacterial microbiome, the archaeal community was dominated by a single species of methanogen, Methanosphaera stadtmanae. The data presented here provide the first insight into the microbial community within the hindgut of the beaver.

Concepts: Archaea, Bacteria, Microbiology, Rodent, Beaver, Beavers, Castoreum, North American Beaver

2

Elevated concentrations of methylmercury (MeHg) in freshwater ecosystems are of major environmental concern in large parts of the northern hemisphere. Beaver ponds have been identified as a potentially important source of MeHg. The role of beavers might be especially pronounced in large parts of Europe, where beaver populations have expanded rapidly following near-extirpation. This study evaluates the role of the age and colonization history (encompassing patterns of use and reuse) of ponds constructed by the Eurasian beaver Castor fiber in regulating MeHg concentrations in Swedish streams. In 12 beaver systems located in three regions, we quantified MeHg concentrations together with other relevant parameters on five occasions per year in 2012-2013. Five were “pioneer” systems, inundated for the first time since beaver extirpation, and seven “were recolonized”, with dams reconstructed by newly recolonizing beavers. MeHg concentrations in pioneer but not in recolonized beaver systems were up to 3.5 fold higher downstream than upstream of the ponds, and varied between seasons and years. Our results show that pioneer inundation by beavers can increase MeHg concentrations in streams, but that this effect is negligible when dams are reconstructed on previously used ponds. We therefore expect that the recovery and expansion of beavers in the boreal system will only have a transitional effect on MeHg in the environment.

Concepts: Water, Rodent, Beaver, Poland, European Beaver, Beavers, Castoreum, Castoridae

1

The comeback of the Eurasian beaver (Castor fiber) throughout western and central Europe is considered a major conservation success. Traditionally, several subspecies are recognised by morphology and mitochondrial haplotype, each linked to a relict population. During various reintroduction programs in the 20th century, beavers from multiple source localities were released and now form viable populations. These programs differed in their reintroduction strategies, i.e., using pure subspecies vs. mixed source populations. This inhomogeneity in management actions generated ongoing debates regarding the origin of present beaver populations and appropriate management plans for the future. By sequencing of the mitochondrial control region and microsatellite genotyping of 235 beaver individuals from five selected regions in Germany, Switzerland, Luxembourg, and Belgium we show that beavers from at least four source origins currently form admixed, genetically diverse populations that spread across the study region. While regional occurrences of invasive North American beavers (n = 20) were found, all but one C. fiber bore the mitochondrial haplotype of the autochthonous western Evolutionary Significant Unit (ESU). Considering this, as well as the viability of admixed populations and the fact that the fusion of different lineages is already progressing in all studied regions, we argue that admixture between different beaver source populations should be generally accepted.

Concepts: Genetics, Germany, Population genetics, Beaver, Poland, European Beaver, Beavers, Castoreum

0

The North American beaver (Castor canadensis) is a managed species in the United States. In northern Wisconsin, as part of the state-wide beaver management program, the Chequamegon-Nicolet National Forest removes beavers from targeted trout streams on U.S. Forest Service lands. However, the success of this management program has not been evaluated. Targeted removals comprise only 3% of the annual beaver harvest, a level of effort that may not affect the beaver population. We used colony location data along Forest streams from 1987-2013 (Nicolet, northeast Wisconsin) and 1997-2013 (Chequamegon, northwest Wisconsin) to assess trends in beaver colony density on targeted trout streams compared to non-targeted streams. On the Chequamegon, colony density on non-targeted trout and non-trout streams did not change over time, while colony density on targeted trout streams declined and then stabilized. On the Nicolet, beaver colony density decreased on both non-targeted streams and targeted trout streams. However, colony density on targeted trout streams declined faster. The impact of targeted trapping was similar across the two sides of the Forest (60% reduction relative to non-targeted trout streams). Exploratory analyses of weather influences found that very dry conditions and severe winters were associated with transient reductions in beaver colony density on non-targeted streams on both sides of the Forest. Our findings may help land management agencies weigh more finely calibrated beaver control measures against continued large-scale removal programs.

Concepts: Beaver, Beavers, Castoreum, Fur trade, North American Beaver, Lincoln Park, National symbols of Canada, Flow device

0

The North American beaver (Castor canadensis) is an invasive species in southern Patagonia, introduced in 1946 as part of a program by the Argentine government to augment furbearers. Research focus has turned from inventorying the beaver’s population and ecosystem impacts toward eradicating it from the region and restoring degraded areas. Successful restoration, however, requires a fuller determination of how beavers have altered physical landscape characteristics, and of what landscape features and biota need to be restored. Our goal was to identify changes to the physical landscape by invasive beaver. We analyzed channel and valley morphology in detail at one site in each of the three major forest zones occurring on the Argentine side of Tierra del Fuego’s main island. We also assessed 48 additional sites across the three forest biomes on the island to identify a broader range of aquatic habitat occupied and modified by beaver. Beaver build dams with Nothofagus tree branches on streams, which triggered mineral sediment accretion processes in the riparian zone, but not in ways consistent with the beaver meadow theory and only at a few sites. At the majority of sites, beavers actively excavated peat and mineral sediment, moved thousands of cubic meters of sediment within their occupied landscapes and used it to build dams. Beaver were also common in fen ecosystems where pond formation inundated and drowned peat forming mosses and sedges, and triggered a massive invasion of exotic plant species. Results highlight that restoration of fen ecosystems is a previously unrecognized but pressing and challenging restoration need in addition to reforestation of Nothofagus riparian forests. We recommend that decision-makers include the full ecosystem diversity of the Fuegian landscape in their beaver eradiation and ecosystem restoration plans.

Concepts: Ecology, Ecosystem, Beaver, Invasive species, Beavers, Castoreum, Fur trade, North American Beaver

0

The proximate composition of meat from young and mature European beaver and physicochemical properties during storage were investigated. The young beaver meat contains 20.52g of protein and 1.86g of fat in 100g, while mature animals 22.16g and 0.73g. Index of nutritional quality for protein ranged from 2.03 to 2.24. Storage had a greater impact on the physicochemical properties of beaver meat than animal age and muscle type. The meat of mature beavers was significantly (P<0.05) darker (L*=28.51) in comparison with young animals (L*=30.79) and contained significantly (P<0.01) more total pigments. However, the negative b* values (between -2.05 and -2.19) indicated a bluish tint on the surface of beaver meat. The significantly (P<0.05) lower drip loss and cooking loss showed semimembranosus (0.65% and 17.89%) compared to longissimus thoracis et lumborum muscle (0.84% and 19.58%). Significantly (P<0.01) lower values of TBARS, drip loss and cooking loss were determined in meat at 24h (0.15mgMDAkg(-1), 0.59% and 15.99%) in comparison with stored for 7days (0.46mgMDAkg(-1), 0.90% and 21.49%). Generally, storage for 7days improved meat water holding capacity and tenderness. W-B shear force and shear energy of beaver meat decreased from 51.4N and 0.21J at 24h to 33.2N and 0.11J at 7days.

Concepts: Nutrition, Force, Beaver, Norway, European Beaver, Beavers, Castoreum, Iliocostalis

0

A new species of demodecid mite, Demodex castoris sp. nov. (Acari: Prostigmata: Demodecidae), is described based on adult stages from the skin of the nasal region of the Eurasian beaver Castor fiber Linnaeus, 1758, collected in Poland. This is the first detection of a representative demodecid mite in rodents of the suborder Castorimorpha and also represents the first detection of a skin mite in Eurasian beavers. The new species is a small skin mite (average 173 µm in length) characterized by sexual dimorphism related to body proportions. D. castoris sp. nov. was observed in 4 out of 6 beavers examined (66.6%), with a mean intensity of 10.8 and an intensity range of 2-23 ind. host-1. This paper also contains a checklist of parasitic arthropods known from Castor spp.

Concepts: Rodent, Beaver, Poland, Fauna of Finland, European Beaver, Beavers, Castoreum, Castoridae

0

We report the first finding of Trichinella britovi in a European beaver. In Latvia, beaver is a common game animal and frequently used in human diet. A high prevalence of Trichinella infections in Latvia is present in the most common hosts-carnivores and omnivores. In total, 182 European beaver muscle samples were tested for Trichinella larvae accordingly to the reference method of European Communities Commission Regulation (EC) No. 2075/2005 (2005). Trichinella britovi larvae were detected in one animal (prevalence 0.5 %; intensity 5.92 larvae per gram of muscle). This finding suggests that the consumption of European beaver meat can be a risk to human health. Further studies are needed in order to determine if the present observation represents an isolated individual case or low prevalence of Trichinella infection in beavers.

Concepts: Health, Nutrition, European Union, Beaver, Norway, European Beaver, Beavers, Castoreum